Machine Learning Models for Electron-Impact Ionization Cross Sections and Mass Spectra

8 Sep 2026, 10:10
30m
Talk Machine Learning in Physics Machine Learning in High Energy Physics

Speaker

Bartosz Majewski (Gdańsk University of Technology)

Description

Electron-impact processes are fundamental to analytical chemistry, plasma physics, radiation science, and astrochemistry, yet experimental measurements remain costly and incomplete. We present machine learning approaches for predicting two key electron-impact observables directly from molecular structure: electron ionization mass spectra (EI-MS) and total electron-impact ionization cross-sections.

For EI-MS prediction, we developed a hybrid model combining a graph neural network encoder, a residual neural network decoder, cross-attention refinement, bidirectional prediction, and chemistry-informed masking. Trained on the NIST14 EI-MS database (molecules ≤500 Da), the model achieves strong library-matching performance (Recall@10 ≈ 80.8%). For ionization cross-sections, we introduce a stacked ensemble integrating LightGBM, CatBoost, a multilayer perceptron, and a graph neural network, combined through a residual LightGBM meta-model. Trained on 212 molecules from the Astrochemistry Low-energy Electron Cross-Section database, the ensemble achieves a test-set RMSE of 1.160 a₀² and a Spearman correlation of 0.990, outperforming all individual models.

The results demonstrate that graph-based molecular representations enable accurate prediction of complementary electron-impact properties. These approaches can augment reference databases, support molecular identification, and reduce the need for costly experimental measurements.

Primary authors

Bartosz Majewski (Gdańsk University of Technology) Prof. Marta Łabuda (Gdańsk University of Technology)

Presentation Materials

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